pgaudet
pgaudet
Reactome describes a reaction methylating U44 ( EC:2.1.1.211 / RHEA:43100), which is not yet in GO.
@amandamackie - can you use GO:0106339 which corresponds to EC 2.1.1.200? I am not sure I understand your comment, Thanks, Pascale
Thanks for clarifying @amandamackie ! This is quite odd. I opened an ontology ticket to address this: https://github.com/geneontology/go-ontology/issues/28550 Basically I think we should align with EC and add the two...
@deustp01 Have you moved the Reactome annotation (Reactome:R-HSA-6788707 > GO:tRNA (uracil-2'-O-)-methyltransferase activity ; GO:0052665) to new term GO:0141101 tRNA(Ser) (uridine(44)-2'-O-)-methyltransferase activity? If so, then we can close this.
3 BHF 1 MGI https://docs.google.com/spreadsheets/d/1n8vfZMOMYWUjXNeTmG7KVRvC6kbPNglDuN8GCQz4W1g/edit#gid=0
Annotations left: assigned_by | count -- | -- FlyBase | 1 MGI | 88 Reactome | 1 UniProt | 1 -- DONE ZFIN | 4 Spreadsheet is here: https://docs.google.com/spreadsheets/d/1lq3LUwubasDFHxaDC-bKnQk2Rl5xCnaRQqOpfwotalE/edit?gid=0#gid=0
Right - I also dont know how that one sneaked in. I removed it from the review already.. Thanks for reviewing Reactome annotations @deustp01 !
It should be possible to use a more specific child: BHF-UCL 2 + ParkinsonsUK-UCL 2 UCL done InterPro 1 MGI 21 RGD 5 UniProt 3 WB 12 ZFIN 1 GO:0007191...
Hi @sarach06 In fact when I read the InterPro description for this entry, I think the association should be deleted: > It was originally thought that the Neuron-specific vesicular protein...