pgaudet
pgaudet
> Since we are supposed to use the most commonly used by the community should we use phosphatidylinositol Are you talking about term names or definitions? For term names >>>...
In the labels I would prefer phosphatidylinositol if the meaning is the same. I know RHEA uses 1-phosphatidyl-1D-myo-inositol.
- [x] EC:1.1.1.117 | GO:0106271 | GO:0045290: removed EC from GO:0106271 since EC not specific for NAD/NADP - [x] EC:1.1.1.146 | GO:0070524 | GO:0102196: removed EC from GO:0102196 (too broad);...
- [x] EC:1.1.1.237 | GO:0102742 | GO:0047995: GO:0102742 R(+)-3,4-dihydroxyphenyllactate:NADP+ oxidoreductase activity >> replace by GO:0047995 hydroxyphenylpyruvate reductase activity; because GO:0102742 represents a specific substrate. No manual annotations - [x] EC:1.1.1.303...
- [x] GO:0000140 acylglycerone-phosphate reductase activity - changed label to acylglycerone-phosphate reductase (NADP+) activity - fixed xref scope: xref: RHEA:17341 {source="skos:exactMatch"} - added xref: RHEA:36175 {source="skos:narrowMatch"} - [x] GO:0018529 nitrilotriacetate...
- [x] EC:7.4.2.1 | GO:0015599 | GO:0015426: Removed EC from GO:0015599 ATPase-coupled L-glutamine transmembrane transporter activity; added RHEA:29895 - [x] GO:0102013 ATPase-coupled L-glutamate tranmembrane transporter activity: Removed EC; added RHEA:29035
Dear all, The proposal has been made to obsolete the following terms, with replacements: -GO:0102742 R(+)-3,4-dihydroxyphenyllactate:NADP+ oxidoreductase activity >> replace by GO:0047995 hydroxyphenylpyruvate reductase activity; because GO:0102742 represents a specific...
- [x] Obsolete GO:0102858 1-18:2-2-18:3-phosphatidylcholine desaturase activity](http://purl.obolibrary.org/obo/) : removed from MetaCyc (only source for the term)
- [x] GO:0050184 phosphatidylcholine desaturase activity - fixed label to align with EC: acyl-lipid omega-6 desaturase (cytochrome b5) activity - fixed reaction to align with RHEA: "Catalysis of the reaction:...
Obsoletions 2024-06-18: - GO:0102853 1-18:1-2-18:1-sn-glycerol-3-phosphocholine desaturase activity & replace by GO:0050184 phosphatidylcholine desaturase activity because GO:0102853 represents a specific substrate. No annotations. - GO:0102851 1-18:2-2-16:0-phosphatidylglycerol desaturase activity & replace by...