Peter Kruczkiewicz

Results 21 issues of Peter Kruczkiewicz

Hello, Python 2 is no longer supported and has been ["sunsetted"](https://www.python.org/doc/sunset-python-2/). As such, are there any plans to remove the Python 2 code and replace it with more idiomatic Python...

My lab has been washing and reusing the same Nanopore flowcells for multiple runs with different pools of samples since we are often sequencing small viruses, which do not require...

It would be really nice to see the external sample name in Samples, Libraries and Library Aliquots tables on the various pages where these tables are displayed. I currently need...

Hello, I was trying to set the "Targeted Sequencing" value for a Library Aliquot with Design Code "TS (Targeted Sequencing)", however, no "Targeted Sequencings" appear in the dropdown menu. There...

Hello, Is it possible to hide and make STR status optional? Our lab doesn't perform this test, yet it's a mandatory field in MISO for sample data entry. Thanks!

We've encountered issues with the reporting of ORF1ab mutations falling in the ORF1b region where the -1 frameshift is not taken into account by SnpEff. Nextclade uses a different GFF...

bug

Add better support for working with subworkflows with Nextflow DSL-2 - info popups (recurse to original process definition?) - input and output completion - working goto definition

It's not clear why this threshold was implemented and what kinds of situations it's supposed to be help with. It seems like it would accidentally exclude certain kmers from subtype...

More user friendly metagenomic results

enhancement