Peter Cock
I currently use ``xsv`` installed from conda via the conda-forge community package collection, https://anaconda.org/conda-forge/xsv https://github.com/conda-forge/xsv-feedstock/tree/master/recipe I would like to do the same for ``qsv`` since I increasingly find myself wanting...
I've not used them much, but LaTeX minted blocks can have optional arguments. My original regex did not consider this. Test and proposed fix attached.
Biopython currently uses a slight variation of what was then known as the Python-style licence, a variant of the OSI approved HPND, see https://github.com/biopython/biopython/blob/master/LICENSE vs https://opensource.org/licenses/HPND For background see this...
Noted by @Will-Tyler #4582, we ought to have a single obvious place to list the (Python) requirements to build the Sphinx based documentation, and use this in the CI.
The LaTeX tutorial used script https://github.com/biopython/biopython/blob/biopython-182/Doc/version.in to capture the current version of Biopython, run via https://github.com/biopython/biopython/blob/biopython-182/Doc/Makefile which passed this to the compiler by defining ``\bpversion`` via the command line. This...
- [x] I hereby agree to dual licence this and any previous contributions under both the _Biopython License Agreement_ **AND** the _BSD 3-Clause License_. - [x] I have read the...
Raised by @idoerg on #1103, how can the existing Biopython translation function/method support translational recoding? e.g. UGA for Selenocysteine https://en.wikipedia.org/wiki/Selenocysteine and UAG for Pyrrolysine https://en.wikipedia.org/wiki/Pyrrolysine
See discussion and proof of principle from @MarkusPiotrowski on #3845. The idea is ``test_NCBI_qblast.py`` would use the new timeout setting, and if it times out, abort the rest of the...
Split out from #895, and harking back to past mailing list discussions where since the existing `.start` and `.end` are really left/right or min/max bounds on a number line compatible...
- [x] I hereby agree to dual licence this and any previous contributions under both the _Biopython License Agreement_ **AND** the _BSD 3-Clause License_. - [x] I have read the...