Oliver Ruebel

Results 46 issues of Oliver Ruebel

### What happened? When running ``python test.py`` from the main directory, I get errors from the validation test suite because it seems to try and run subprocesses from a subdirectory...

### What would you like changed or added to the documentation and why? Participants at the 2022 NWB User Days indicated that documentation for the fields ``idx_start`` and ``count`` could...

topic: docs
priority: low

### What would you like changed or added to the documentation and why? Participants at the 2022 NWB User Days suggested that it will be useful to further consolidate the...

topic: docs
help wanted: good first issue
topic: extension
help wanted: deep dive
priority: low

### What would you like changed or added to the documentation and why? The PyNWB validator checks for structural compliance of NWB files. In practice, however, most users should validate...

topic: docs
topic: validator

### What would you like changed or added to the documentation and why? Once https://github.com/hdmf-dev/hdmf/pull/747 has been released in HDMF, we should update the parallel I/O tutorial accordingly to: 1)...

category: enhancement
topic: docs
priority: low

### What would you like to see added to PyNWB? While reviewing https://github.com/NeurodataWithoutBorders/nwb-schema/pull/523 to propose a new type for OnePhotonSeries, it occurred to me that for attributes the units of...

category: proposal
priority: low

## Motivation #1431 Relate to https://github.com/dandi/dandi-cli/issues/917 This PR extracts the code to determine the cached extension namespace to use for validation from the main function of the command line validator...

category: enhancement
topic: validator

### What happened? In https://github.com/NeurodataWithoutBorders/pynwb/issues/1468#issuecomment-1121507931 @CodyCBakerPhD shows a case where the required attributes ``table`` and ``description`` are being omitted/removed from a ``DynamicTableRegion``. This (not surprisingly) causes the file to fail...

category: bug
priority: medium
topic: validator

### What would you like changed or added to the documentation and why? The following link to conda-forge is broken. It looks like the page may have been removed, but...

category: bug
topic: docs

The pynwb.validate function currently validates by default against the core namespace, whereas the command line validator by default uses the cached namespace. The functionality to use cached namespaces should be...

category: enhancement
priority: high
topic: validator