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Workflow Description Language - Specification and Implementations

Results 126 wdl issues
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Very often I need to slice an array. For instance, in RNA-Seq experiments I have tsv files with first column as a condtion and all subsequent as GSM ids for...

enhancement
Spec Change
feature request

In issue #89 I mentioned a use case of wanting to get a list of 3 kinds of files in a directory *.png *.txt *.html and store this list into...

enhancement

This [WDL forum post](http://gatkforums.broadinstitute.org/wdl/discussion/9734/check-is-string-value-is-in-array-string#latest ) presents a use-case for why a contains style function on arrays could be very useful. It also reflects on the downsides of current workarounds in...

enhancement
Spec Change
feature request

Hi, I was playing around with string concatenation, and I was curious why there is a discrepancy between the two outputs for the example WDL below? I am using the...

I tried to revive #373 but it might not be bumped. So here's a new issue. I'd like to have some clearance on type coercion of the inputs/outputs from the...

This fixes linking behavior in IDEs and leaves behavior in GitHub unaffected. Note that this will break any direct links to section headings that contain emojis! ### Checklist - [x]...

### Checklist - [x] Pull request details were added to CHANGELOG.md - [x] Valid examples WDL's were added or updated to the SPEC.md (see the [guide](https://github.com/openwdl/wdl-tests/blob/main/docs/MarkdownTests.md) on writing markdown tests)

### Checklist - [x] Pull request details were added to CHANGELOG.md - [ ] Valid examples WDL's were added or updated to the SPEC.md (see the [guide](https://github.com/openwdl/wdl-tests/blob/main/docs/MarkdownTests.md) on writing markdown...

The general principal is to return an empty value/write an empty file when possible, and raise an error otherwise. ### Checklist - [x] Pull request details were added to CHANGELOG.md...

Since WDL 1.1 we've been using emojis to mark new and deprecated features. However, the links for these sections are broken in the ToC in some editors (e.g. VS Code)....