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openwdl
Workflow Description Language - Specification and Implementations
The current situation where both inputs and outputs are documented within the **parameter**_meta section can be confusing. I've been told this overloading can be traced back to [this issue](https://github.com/broadinstitute/cromwell/issues/1131) on...
Moving contents of #524 on top of wdl-1.2, rather than trying to rebase. ### Checklist - [x] Pull request details were added to CHANGELOG.md - [x] Valid examples WDL's were...
This PR takes the changes from [@mlin PR](https://github.com/openwdl/wdl/pull/464/files) and moves them to `wdl-1.2`, rather than trying to rebase. There was already a relevant example, so I did not add more....
### Checklist - [x] Pull request details were added to CHANGELOG.md - [x] Valid examples WDL's were added or updated to the SPEC.md (see the [guide](https://github.com/openwdl/wdl-tests/blob/main/docs/MarkdownTests.md) on writing markdown tests)
### Checklist - [x] Pull request details were added to CHANGELOG.md - [x] Valid examples WDL's were added or updated to the SPEC.md (see the [guide](https://github.com/openwdl/wdl-tests/blob/main/docs/MarkdownTests.md) on writing markdown tests)
### Checklist - [x] Pull request details were added to CHANGELOG.md - [x] Valid examples WDL's were added or updated to the SPEC.md (see the [guide](https://github.com/openwdl/wdl-tests/blob/main/docs/MarkdownTests.md) on writing markdown tests)...
### Checklist - [x] Pull request details were added to CHANGELOG.md - [x] Valid examples WDL's were added or updated to the SPEC.md (see the [guide](https://github.com/openwdl/wdl-tests/blob/main/docs/MarkdownTests.md) on writing markdown tests)...
### Checklist - [x] Pull request details were added to CHANGELOG.md - [x] Valid examples WDL's were added or updated to the SPEC.md (see the [guide](https://github.com/openwdl/wdl-tests/blob/main/docs/MarkdownTests.md) on writing markdown tests)...
Contains various fixes that should allow most of the unit tests to work. There are a handful examples that I am unable to verify though. There may be some overlap...
I originally encountered these issues at https://github.com/chanzuckerberg/miniwdl/issues/696. One thing the WDL spec is vague about is how a task should coerce string to file. The spec says that all non-output...