obo-relations
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oborel
RO is an ontology of relations for use with biological ontologies
change from process to process or characteristic (there are other tickets to be linked here but I can't find them) This change is necessary for go-plus to be coherent (currently...
stings
There seems no relation that covers defensive attacks, such as stinging or biting. This might not result in the death of either organism, but is a relation and can have...
On RO call discussing https://oborel.github.io/obo-relations/process-relations/ proposed to obsolete RO:0002012 occurent part of currently unused, and if it is used e.g. in logical defs it will lead to cryptic lack of...
While it is clear that all processes must involve a material entity in some capacity, the input of a process (as one normally understands the meaning of input) need not...
``` RO includes PATO:morphology as a direct subclass of BFO:quality and also morphology as a subclass of physical object quality which is a subclass of PATO quality. I think it...
Violation here has been reported: http://purl.obolibrary.org/obo/RO_0002472
Hi Chris and team, Sebastian from Andrew Su's lab here. We have been working out a set of drug to disease relations which we plan on integrating into Wikidata. As...
Many of these may end up being subproperties of RO relations, as they are quite specific @balhoff may have done some of this already
https://www.ebi.ac.uk/ols/ontologies/mi/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FMI_2234  Note we cannot import this as a branch in RO as MI is classes and RO represents the relation. Proposal: shadow the causal statement branch, and formally define...
The ODK allows us to create a repo with standardized layouts for github issue templates, intstructions for contributors etc https://github.com/INCATools/ontology-development-kit/ E.g. https://github.com/INCATools/ontology-development-kit/blob/master/template/CONTRIBUTING.md.jinja2 (note this needs something about PRs) We shoudl...