Nick Tustison
Nick Tustison
Thanks, @stnava. I'll check out the latest repo for a test drive on some of the stuff I'm working on and let you know if I encounter anything.
Thanks @gdevenyi . Hey @jamesjcook , can you remind me what the size of images you're dealing with and some of the current compression times that you're seeing? I know...
Hi @gdevenyi , Please put a small example together including data and command line calls illustrating the problem and I'll take a look when I get a chance. Nick
Different packages use different elements of the nifti header in different ways. It's unfortunate but we don't have the capacity to facilitate compatibilities with these other packages. Know that transforms...
Thanks @aghayoor . I'll try to take a look tomorrow and follow up with any questions.
Is this only applicable to the scenario mentioned above where you want to perform up to the segmentation stage and then skip to quality control? If so, this would seem...
Thanks @aghayoor . Is there a reason why we can't just incorporate the improvements proposed by this script into the antsCorticalThickness.sh script?
I can appreciate needing each part of the segmentation pipeline to be validated but, correct me if I'm wrong, isn't the segmentation pipeline simply a subset of the cortical thickness...
@gdevenyi Although @stnava should weigh in, I think that would be great.
Thanks @cookpa . I noticed this in the ITK release announcement so good to have it here.