Nathan Sheffield

If your userSets have regions that overlap multiple universe regions, this can happen. So, you haven't defined your userSets in terms of your universe. One giant region in the userSet...

Your userSets should already be disjoint, or else you would get an error. Removing negative c entries isn't the best because the fact that you have negative c entries is...

do you mind putting the database somewhere where I can download it? Or email it to me ([contact info](https://med.stanford.edu/profiles/nathan-sheffield))

And for your side question: No, these are very different. Option 1: just puts your user sets into the universe (and then disjoins them so there are no overlaps, separating...

> Sorry I can't as it also contain some unpublished data that I don't own. Just a reproducible minimal example would be fine, if you can concoct one. > So,...

Did this ever get tracked down? we are having a situation where salmon seems to segfault whenever using slurm (this time it's `salmon index` that segfaults, though). wondering if you...

@mrdrogdrog > This issue is mostly about adding criticmarkup. What you describe here ("comments/suggestions without changing the document") is another feature request. Please open another feature request issue for that....

Doesn't this work if you just type both keywords into the search box, separated by a space?

that is a thing of beauty. :icecream:

hey @johanneskoester what do you think? What's the next step?