Nathan Sheffield

Results 309 comments of Nathan Sheffield
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Related to: https://github.com/refgenie/refgenconf/issues/119

what would be ideal for refgenie is a simple mapping from asset key to recipe to build that asset. Adding a new buildable asset would be simply adding a recipe...

maybe we don't *want* to enable this...

Hey @stolarczyk -- in conversation with @natefoo, this would be a useful feature for integration with galaxy, as they'd like to mirror a refgenieserver... (just download everything). So, even something...

> so this would go even beyond a single genome? Yeah. that would be everything. how hard would it be to implement `--all` and `--mirror`?

wouldn't it be something like `--assets fasta=mm10/fasta:cdna` ?

Yeah that would be great! This is along the lines of a recipe splash page.

Hey @birnbera thanks for the question. Development will continue and the project will likely increase in scope in the coming months/years. We did slow down a bit over the past...

This is a good catch. We worked through many of these issues when doing this locally, and seemed to have gotten everything working, but it looks like something has snuck...