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nextflow-io
A DSL for data-driven computational pipelines
## New Feature & Justifying Scenario Scenarios arise where an arbitrary number of same-named files get generated by some process which are then passed as an input to a subsequent...
Not completely sure if this is a bug: I am running into an issue when using the option followLinks in the output section and combining it with the regex. Here...
## Bug report ### Expected behavior and actual behavior According to, https://www.nextflow.io/docs/latest/process.html#multiple-output-files, a glob pattern can be used to emit a list of multiple items from a process into an...
## Bug report (Please follow this template replacing the text between parentheses with the requested information) ### Expected behavior and actual behavior When running with AWS batch some container image...
### Summary The goal of this enhancement is to allow users to propagate label/tag annotations to the corresponding cloud execution platform. This is a recurrent request from Nextflow users. See...
After doing some digging I found that hyperqueue does have a concept of "job state" vs task state, but it doesn't include the job state in the JSON output for...
## Usage scenario Azure Batch supports multiple usage styles: A Batch Service can have a public endpoint or a private one and nodes can be provisioned in a Batch managed...
This PR tries to address the issue described in https://github.com/nextflow-io/nextflow/issues/3098
Not sure if this is the correct place for this, my apologies if it isn't. The current documentation for [the into operator](https://www.nextflow.io/docs/latest/operator.html#into) says that it is not longer available in...
### Expected behavior and actual behavior Hello, We are attempting to run a pipeline on our k8s cluster. The code and the docker images are hosted in an enterprise GitLab...
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A DSL for data-driven computational pipelines