fusioncatcher

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Changed #!/usr/bin/python for #!/usr/bin/env python, because if it is left in that way it won't complete execution of the fusioncatcher-build.py script sh: 1: add_custom_gene.py: not found ERROR: Workflow execution failed...

6EMNKEY

why fusioncatcher didn't work until the sencond run?

1

I test fusioncatcher using the test fq files: ``` http://sourceforge.net/projects/fusioncatcher/files/test/reads_1.fq.gz http://sourceforge.net/projects/fusioncatcher/files/test/reads_2.fq.gz ``` for the glibc error reason, I can only run it through a singularity image: `singularity exec -B /mnt/lustre/user/wubin/01.Program/Scripts/02.software/Fusioncatcher/fusioncatcher:/mnt,/mnt/lustre/user/wubin/01.Program/Scripts/02.software/Fusioncatcher/fusioncatcher/test/fq_dir:/tmp,/mnt/lustre/user/wubin/01.Program/Scripts/02.software/Fusioncatcher/fusioncatcher/test/output:/opt...

windtalker6

issue #194 quick fix or else the tools needs to be removed from the documentation and this install script.. Don't pull because I didn't test the bootstrap script.

mmterpstra