Nathan Weeks
Nathan Weeks
I think the errors in the tcoffee_extractfrompdb tests should be resolved by https://github.com/nf-core/modules/pull/9489
The tcoffee_extractfrompdb tests should now pass, and I further increased the shards from 30 to 60 in an attempt to get the two failing docker tests to pass without "no...
Is there anything left to be done for this PR? I'd like to see Space Ranger 4.0.1 available for use by nf-core/spatialvi to fix an issue I have running that...
There seems to be a unicode character (?) in the quay.io URLs that's causing `nf-core module lint spaceranger` to fail with three `container_links: Unable to connect to container URL` errors....
> There seems to be a unicode character (?) in the quay.io URLs that's causing `nf-core module lint spaceranger` to fail with three `container_links: Unable to connect to container URL`...
I've had some success using rootless podman (version 4.9.4) on the host by overriding the /var/run/docker-host.sock bind mount to use the path to the podman socket as the source, setting...
I also encountered this issue. It would be helpful if the PR could be reviewed/merged.