Nate Coraor

Results 175 comments of Nate Coraor

A comment from @jennaj about the same error with another tool where the user had erroneously selected the same input twice led me to what I suspect is the answer...

A tool/IUC person should probably review this prior to installation.

There are too many mothur tools to do this easily and it would be a hit to our throughput if we just did it for all of them. However, we...

As of 2018-06-01 we are now collecting max memory usage with the cgroup metric plugin. We should have enough data to start making some decisions about this, and other tools,...

Looks like it's fixed in galaxyproject/galaxy#6255, it just needs to be backported to 18.05. Test was updated yesterday so we should be able to test there.

Assuming I did this right, it still doesn't see this collection: https://test.galaxyproject.org/u/nate/h/multiqc-input-test

@mvdbeek Hrm, should the collection be selectable as an input now though?

A bit more info, you have to run this from somewhere that has access to the tools on disk and the absolute paths as known by the server must match....

This is due to conda/conda#5536, I've been able to get past the solver hang by temporarily setting the defaults in `~/.condarc` to only the `main` and `free` channels as described...