Nate Coraor

I don't see any errors associated with `/api/tools?q=` requests in the logs. Here's sizes of the indexes: ```console [ndc@galaxy-main1 ~]$ ls -lR /srv/galaxy/main/var/tool_search_index /srv/galaxy/main/var/tool_search_index: total 0 drwxr-xr-x. 2 g2main G-803372...

I installed the phyloseq IT on .org but don't have data to test it, can someone do that please? humann databases are updated as per the linked issue. kraken2, blastn,...

We are seeing this in Galaxy as well, although in our case, Quast runs inside of a Singularity container, and the contents are read-only (despite this we still receive errno...

You might also be interested in https://github.com/galaxyproject/gxadmin/pull/139

This version check was added in #92 but it's not clear why, I probably assumed that those definitions were made public in 24.11 but it doesn't look like they were....

Do you know how yours got set to the local TZ in the first place? I can't recall having seen the timezone being set in the past. What's the OS/install...

`apt show postgresql-16` (or whatever your package name is) should show the source, particularly under `APT-Sources`.

That looks like just a standard Debian mirror to me, meaning you are probably using the standard Debian postgresql package. I guess what you're saying though is that it always...

I agree, it is strange we don't see this more, I have noticed the weirdness in `/admin/jobs` before but I think that's the only place (and update times on TS...

Are you sure it was removed? It still appears in the dev version, the most I can find is that the signature changed slightly in https://github.com/SchedMD/slurm/commit/7db34cd299626dbec9120886cd5d0efbf0c6f96f.