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Corrupted aux data for read

1

# Issue Report ## Please describe the issue: I am running dorado for base calling and alignment. The base calling can run successfully, but when doing alignment, it always raise...

yuxinPenny

Hello dorado developers, I know that for software like Guppy putting a direct link to a Guppy download was not allowed as it was proprietary. But given Dorado is open-source,...

hasindu2008

Barcode demultiplexing with dorado 0.6.1

2

When basecalling with Dorado 0.6.1 it is not successfully assigning barcode groups/demultiplexing using kit SQK-RBK114-24. We have tested basecalling the same small POD5 file and have varying results: With Dorado...

shair89

basecalling with hac v4.2 vs v4.3 model

1

If I have two "batches" of sequencing data and one is basecalled with: [email protected] and the other with: [email protected] Will this greatly affect my results? Should re-do basecalling so all...

eesiribloom

Dorado duplex stand alone v 0.6.0 : when the models are in a different location. How to configure dorado to look for models elsewhere?

2

# Issue Report My stand alone installation of dorado on a unix-based cluster did not come with the models. I downloaded the models manually; but dorado doesn't seem to see...

grendon

i miss guppy's barcoding_summary.txt (enhancement)

2

Hi everyone, I was an enthysiastic guppy user and, although i love dorado, i really miss the barcoding_summary.txt file that was produced during demultiplexing/barcode-trimming (and, as far as i've understood,...

Puputnik

Inquiry Regarding Slow Performance with Dorado Basecaller

7

Dear developers, The size of one dataset is about 80.0GB, and it's stored on a local disk (when running, GPU memory = 34.3/55.8 GB) the following is the CPU and...

xiangpingyu

Dorado 0.5.3 - memory issues - BAM truncated?

20

# Issue Report We have some data that I am not able to perform the basecalling. I tried with two approach, but I got different errors in both test. ##...

cfrias-cnag

Empty values for columns "template_start" and "template_duration" in summary for barcoded reads

1

# Issue Report ## Please describe the issue: Hello, I've noticed that, after demultiplexing, some reads have missing values for the columns "template_start" and "template_duration" in the summary produced by...

luigilamparelli

Problem building with cmake on an intel macbook pro 2020.

5

I have an intel macbook pro 2020 but have failed to make the dorado build.

ddrazoh