John Muschelli

Bioconductor Local installation misclassified source

3

Tagging @jennybc for the `devtools` component of this. Overall the issue occurs when you have a local installation of a package that has a `biocViews` tag, typically from `devtools`, that...

SSH External Git Install with *short* SHA Ref fail

4

# SSH Installs Fine (Just for checking) This works fine and if the ref is a tag, then it seems to work fine ``` r remotes::install_git("[email protected]:tidyverse/stringr.git", git = "external") #>...

Any way to screen record

4

Is it possible to do a screen recording versus a webcam recording? I think it'd be an interesting addition, where `stream(index = 1)` for example, would allow people to record...

1. Used updated sparsepp as referenced from https://github.com/dselivanov/r-sparsepp/issues/3 and https://github.com/greg7mdp/sparsepp/issues/66. Should be ready to go on CRAN (with new comments). 2. New Travis YAML 3. New roxygen2 updates (so whitespace),...

Ssd7 Model

4

# createSsd7Model2D fails for 2D ``` r library(ANTsRNet) createSsd7Model2D(c(256, 256, 3), 2) #> Error in py_call_impl(callable, dots$args, dots$keywords): ValueError: Duplicate node name in graph: 'packed' #> #> Detailed traceback: #>...

Default for SuperResolutionGanModel is bad for `64x64x3`, but needs to be `112x112x3`. Technically the product needs to be `25088/2 = 12544` ``` r library( keras ) library( ANTsRNet ) keras::backend()$clear_session()...

``` r library(ANTsRNet) library(ANTsR) #> Loading required package: ANTsRCore #> #> Attaching package: 'ANTsRCore' #> The following objects are masked from 'package:stats': #> #> sd, var #> The following objects...

There is an error on https://github.com/ANTsX/ANTsRNet/blob/master/R/createDeepDenoiseSuperResolutionModel.R#L90 The first argument of `layer_add` is the inputs (list of tensors) and the second argument is the `batch_size`. When piped, this is putting `outputs`...

Duplicate reference https://neurostars.org/t/encoding-of-neurovault-curl-output/5576/4 Something about the HTTP configuration has `content-encoding` misspecified. This seems to happen only on Windows cURL. For example, trying to download: https://neurovault.org/media/images/77/zstat-young.nii.gz ``` curl -v -s https://neurovault.org/media/images/77/zstat-young.nii.gz...

Divisible height/width

3

Ran into this in the past with `ffmpeg`, so I figured it may be a good use case for `vfilter` or something to put as a check so users can...