Marcel Schilling
Marcel Schilling
@fboehm: Looks like it was called `as_plotly` but was removed in 3e09ad680d848f380681c63f8d317e0eb4859338. Not sure if `to_widget` can be exploited to use `orca` but probably not. You might be able to...
@fboehm: OK - I gave this a couple of minutes and the best I came up with is this: ```r library(magrittr) library(iheatmapr) library(plotly) hm % as.matrix %>% main_heatmap pl %...
Thanks a lot for your fast feedback. Another main concern with any solution so far is the need to know the name/label of the row cluster colorbar (`"RowClusters"` in this...
@dasiav7: The link you inclued points to https://github.com/ropensci/iheatmapr/issues/url instead of https://plot.ly/r/subplots/.
@mjko1210: You might want to [read up on TPM](https://haroldpimentel.wordpress.com/2014/05/08/what-the-fpkm-a-review-rna-seq-expression-units/). What you observe is to be expected: Basically, you ask kallisto the question '*Out of one million reads that map to...
@dlaehnemann: I ran into the same issue as you (and reported here). Since your PR was ignored until now and this was not fixed in a different way either, I...
@warrenmcg & @pimentel: How about capping the defaulting `num_cores` to the available memory / 10 G? How much does RAM usage depend on the number of bootstraps? Are there any...
@sekhwal > [build] counting k-mers ... terminate called after throwing an instance of 'std::bad_alloc' This looks like you ran out of memory. Can you share some details about the machine...
looks like an out-of memory situation to me...
@mr-eyes: Why was this closed now?