Mike Lin

Results 78 issues of Mike Lin

**This PR shouldn't be merged**; its purpose is to provide the complete git diff for our [codelab on adding assertion statements](https://miniwdl.readthedocs.io/en/latest/assert.html) to WDL. It should be kept able to merge...

**This PR shouldn't be merged**; its purpose is to provide the full git diff for our [codelab on adding WDL functions](https://miniwdl.readthedocs.io/en/latest/add_functions.html). It should be kept able to merge with the...

Currently `link_outputs` fails (errors out) if a `File` output isn't an extant, local filename. Normally it should be; but plugins may want to rewrite task outputs for various reasons (e.g....

extensibility

**miniwdl is tested on *Intel* macOS**, with a few specific setup steps: - [ ] Install [Docker Desktop for Mac](https://docs.docker.com/docker-for-mac/install/) - Use Docker's menu bar icon to select: - [...

tech debt
devex

Check that tar (running as root inside a container) is able to set ownership/permissions on the extracted files, per its default behavior https://superuser.com/questions/1435437/how-to-get-around-this-error-when-untarring-an-archive-tar-cannot-change-owner

interop

Probably sufficient to search through workflow identifiers just-in-time & report lowest case-insensitive edit distance.

devex

File GitHub issues for bugs and feature requests in the miniwdl code. Shorter-lived support questions may be better directed to: * [OpenWDL Slack](https://openwdl.slack.com/) (#miniwdl channel) * [Bioinformatics Stack Exchange](https://bioinformatics.stackexchange.com/questions/tagged/wdl) (WDL...

Track use of every expression and control structure over a series of workflow runs, and summarize in some auto-consumable way e.g. https://docs.coveralls.io/api-introduction

enhancement
devex