Stijn van Dongen

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icon company Bits Bytes and Bases icon location Cambridge icon location MCL clustering, Nextflow, C, Perl, R, bash, PostScript, Python et cetera. Network analysis, bioinformatics, algorithms, discrete mathematics.

Results 4 repositories owned by Stijn van Dongen

apparix

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Command line directory bookmarks with jumping to bookmarks, subdirectory tab completion, distant listing etc

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mcl

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MCL, the Markov Cluster algorithm, also known as Markov Clustering, is a method and program for clustering weighted or simple networks, a.k.a. graphs.

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bash-utils

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Unix terminal histograms, sequencing depth and bar charts (hissyfit). Small data/file munge, morph, find and count scripts/functions in various languages, mostly bash and perl. For apparix see the ap...

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nextflow-idioms

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Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.

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