Stijn van Dongen

icon indicating a website link https://micans.org/

icon company Bits Bytes and Bases icon location Cambridge icon location MCL clustering, Nextflow, C, Perl, R, bash, PostScript, Python et cetera. Network analysis, bioinformatics, algorithms, discrete mathematics.

Results 4 repositories owned by Stijn van Dongen

apparix

34
Stars
2
Forks
Watchers

Command line directory bookmarks with jumping to bookmarks, subdirectory tab completion, distant listing etc

verified publisher icon micans

mcl

81
Stars
12
Forks
Watchers

MCL, the Markov Cluster algorithm, also known as Markov Clustering, is a method and program for clustering weighted or simple networks, a.k.a. graphs.

verified publisher icon micans

bash-utils

20
Stars
2
Forks
Watchers

Unix terminal histograms and bar charts (hissyfit). Small data/file munge, morph, find and count scripts/functions in various languages, mostly bash and perl. For apparix see the apparix repository t...

verified publisher icon micans

nextflow-idioms

16
Stars
6
Forks
Watchers

Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.

verified publisher icon micans