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Standard terms for annotating mammalian phenotypic data

Results 100 mammalian-phenotype-ontology issues
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check that eqs fit the UPheno pattern and have correct UBERON terms UPheno also needs fix to use the correct PATO term 'detached_from' removing eq from detached Reissner membrane -...

axiom
patterns

decreased kidney glutathione reductase level increased kidney glutathione reductase level currently only under homeostasis, should also be under kidney morphology

placement request

It would be nice if you could add the narrow synonyms entered below for neuron degeneration (MP:0003224). Similar synonyms for children terms of neuron degeneration (MP:0003224) would also be nice....

synonym request

see [J:304644](http://prodwww.informatics.jax.org/pwi/edit/referencesummary?accids=J%3A304644) and [J:233742](https://www.informatics.jax.org/reference/J:233742) Both currently annotated to abnormal respiratory epithelial transmembrane transport Take a look to see if there are other annotations to other terms consider adding abnormal/impaired/enhanced terms...

new term request

should cardiac edema be child of generalized edema? review the definitions of edema terms parent says in tissues but cardiac and generalized say tissues and cavities

question
placement request

There are a few child terms of the MP:0012730 abnormal internal carotid artery morphology that are missing definitions. These include: absent canalicular internal carotid artery segment absent proximal internal carotid...

definition request

Consider adding a new term for heart ventricle hypertrophy (a child of cardiac hypertrophy MP:0001625, increased heart ventricle size MP:0008772, abnormal cardiac muscle tissue morphology MP:0010630 and abnormal heart ventricle...

new term request
KidsFirst

For **MP:0003084 abnormal skeletal muscle fiber morphology** and all relevant children, grand-children, parents and grand-parents, cousins, nieces, nephews, aunts and uncles: new synonyms using _myofiber_ in place of _muscle fiber_...

synonym request

While working on [#3874](https://github.com/mgijax/mammalian-phenotype-ontology/issues/3874), Anna made abnormal sinoatrial valve morphology [MP:0011646](https://www.informatics.jax.org/vocab/mp_ontology/MP:0011646) a direct child of abnormal heart valve morphology [MP:0000285](https://www.informatics.jax.org/vocab/mp_ontology/MP:0000285) and removed it from under abnormal heart development [MP:0000267](https://www.informatics.jax.org/vocab/mp_ontology/MP:0000267). Sue...

enhancement
placement request

Look at changes in https://github.com/obophenotype/human-phenotype-ontology/issues/10256 to see what changes we should make

HPO mapping
KidsFirst