Mervin Fansler
Mervin Fansler
> Is sth like `conda run -n p310 ipython` ever going to be possible? @NightMachinery why isn't it already? I daily run Jupyter, Emacs, and Rstudio through `conda run`. Note...
Is there any chance there is a `debugpy` installed in the user site (usually, `~/.local/python3.7/site-packages/`)? User site packages will take precedence [unless one tells Python to ignore them](https://github.com/conda/conda/issues/7707), e.g., for...
Conda version is too old. Please upgrade.
What GTF and FASTA did you use? Do the read names in the FASTA match the transcript IDs in the GTF? I found with GENCODE for mm10, you have to...
The latest commit adds functionality to the BAM reader so that sequences aligned in reverse complement are transformed back to their (presumably) original sequences. This is essential for performing a...
Any feedback on this?
I don't know the internals of what causes the issue, but it has something to do with how the fragment length is used to constrain possible alignments. You can use...
Note the Activity Monitor subtitle: "Opérations du GPU". This means you have subsetted to only processes that also use GPU, which does not include `kallisto`. To change the subset of...
@minkbaek I'd suggest that when creating YAML files from a Conda environment, it is better practice to export both a full version (for record keeping) and a minimal version (for...