Michael Baudis
Michael Baudis
Is there a need for non-integer values in the digest representation of a copy number state/value? IMO not; any non-integer values used there would represent a value that has or...
As mentioned in an exchange w/ @ahwagner the **representation of relative copy number states is essential** since: * most analyses do not deliver copy number counts - in fact the...
As of January 18, 2022 the [`copy number assessment`](http://www.ebi.ac.uk/efo/EFO_0030063) class and its tree are represented in the Experimental Factor Ontology (EFO): ``` id: EFO:0030063 label: copy number assessment | |-id:...
Great! 2 questions: * any intention to handle "focal genome amplification", or is this too much in the "annotation realm"? * for CN-LOH: this would then be handled as a...
I guess the main arguments against directly using CURIEs would be that * VRS feels that not all of the ones from the EFO branch are suitable for this concept...
I have problems to understand the value - but also the consistency - of describing CTLPs* completely, as single events; especially since they won’t ever happen again, in the exact...
@d-cameron +1 @TanskaAnnna These points are all related to annotation/attribution, not to the representation of sequence alterations _per se_.