Maximilian Haeussler
Maximilian Haeussler
Even for a 100bp input sequence, with repeat-rich plant genomes, bwasw will not complete. I can provide an example test case but if you just run bwasw onto any plant...
- removing Seurat2 support and replace with UpdateSeuratObject() (discovered thanks to @matthewspeir, will save us countless hours of keeping our Seurat 2/3/4 conda environments updated if it works) - adding...
From Holly Beale bring back the "View > hide selection" and "View > show all" menu entries
Almost everyone wants to color by multiple genes. The current plan is to make these changes: - change the gene search box to multi select up to three genes (easy)...
From Jubina Benny: When I try running the example command: python crispor.py sacCer3 sampleFiles/in/sample.sacCer3.fa sampleFiles/mine/sample.sacCer3.tsv -o sampleFiles/mine/sample.sacCer3.mine.offs.tsv I get this error: Traceback (most recent call last): File "crispor.py", line 8458,...
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From Jubina: First of all, the library dependencies of libssl, libpng and libcrypto create error. so I made a symbolic link in order for the program to pick the correct...
From Jubina Benny: INFO:root:converting genePred to segment names: cat /tmp/MusaPhahang/MusaPhahang.gp | awk 'BEGIN {FS=OFS=" ";} // { gsub(" " , "_", $1); gsub(" ", "_", $12); print }' | genePredToBed...
Hi @dpryan79, various people e.g. @diekhans and @mrvollger have asked if there was a conda package to install all the kent tools. I don't know how to figure that out....
**Use case** I work for UCSC and we sometimes get reports that MACS2 or MACS3 files are not valid to loading into our browser. I'd like to help write a...
I have 50 color pickers in my application, created in a for-loop. It would be nice if the change event handler could find out from which DOM element (= which...