Maximilian Haeussler
Maximilian Haeussler
Can you try this command? cp `which bwa` /home/parallels/Documents/crisporWebsite_py39/bin/Linux/ This will overwrite Crispor's own bwa which you cannot run with your bwa. On Sat, Sep 16, 2023 at 6:55 AM...
I’m not entirely surprised, small differences are likely… do you have the example sequence and the exact difference ? Also which versions are you using ? At this moment, the...
it's strange that the sequence does not match the hg38 genomes. Is this intentional? Anyhow, I finally got the Python3 version installed and it gives the same scores as the...
Hm. This is disturbing. I am traveling right now and won't be able to look into this. Do you know which of the two scores are "correct" ? Is there...
What you can do is, you can run the original script, crispor/bin/deepCpf1/DeepCpf1-orig.py. That's the algorithm without any modifications and it has a command line interface. This will make sure that...
Hi, any news from this? Were you able to confirm if the crispor.tefor.net scores are the correct ones? I have another score, the saCas9 score, that has the same problem....
Two other scores have similar problems. I'll have to retain python2 as a requirement I think. Did you try the python2 version ? On Sat, May 6, 2023 at 9:36 ...
I pasted you error into a search engine and found this ticket: https://github.com/satijalab/seurat/issues/1388 Does this somehow help solve your problem? If so, I should probably document that and add something...
Thank you for this observation, we've had someone else complain about this, and it's not intended to be like this, but a bug that has to do with how the...
Very odd. This is different from what I thought. Do you have an example of a failing URL? On Mon, Nov 14, 2022 at 4:51 PM Sam Fenske ***@***.***> wrote:...