lx-1011

Discrepancies between EDTA and RepeatMasker results, how to combine?

12

Dear @oushujun , Thank you for developing this useful tool. I have run it successfully and found that SINEs and LINEs could't be identified based on structure features. However, we...

fail to run " python runWorkflow.py " and "GetAlignmentStats ERROR"

1

Hello! When I run manta to call SV for 200 samples in pig, two samples failed to run "python runWorkflow.py ". **python manta-1.6.0.centos6_x86_64/bin/configManta.py --bam ERR2744277.sort.dedup.bam --referenceFasta /GCF_000003025.6.fa --runDir pathway/** **python...

VISOR SHORtS for simulating pair-end data

1

Dear @davidebolo1993 , Thanks your for this useful tool. I have a question about simulating illumina sequencing data using VISOR SHORtS. Firt, using the same insertion bed file for simulating...