lx-1011

Dear @oushujun Thanks for your response. I have tried to carry out your suggestion, and still have some question, like that: 1. I try to get LINE sequences through their...

Hi @oushujun , Thanks for your response, I have run test_file sussessfully with your suggestion, and i will show the detail later. And then I run the whole genome using...

Hi, @oushujun Thanks for your response. 1. We filtered the result of RepeatMasker (SW score 300, Length 80, div 80), and the number of overlap region of that result accounted...

> Hi Li Xin, > > Is your RM database redundant or not? You may only provide non-redundant sequences to EDTA. This means you need to use one sequence to...

> any luck? Hi Shujun, Thanks for your response. I have run it successfully. # Whole-genome TE annotation (total TE: 35.04%): Sus_scrofa.Sscrofa11.1.dna.chr.fa.mod.EDTA.TEanno.gff3  However, the results show that the percent...

Hello, when you installed manta using conda, you need download manta-1.6.0.centos6_x86_64 (a binary file) from https://github.com/Illumina/manta/releases/download/v1.6.0/manta-1.6.0.centos6_x86_64.tar.bz2. And then you will find it. Best wishes for you! ------------------ 原始邮件 ------------------ 发件人: "Illumina/manta" ***@***.***>; 发送时间: 2021年9月6日(星期一) 晚上7:18...