Luiz Irber

Results 71 comments of Luiz Irber

C bindings with FFI make it reusable in other languages too (any that supports FFI). pyo3 will probably be faster because it integrates deeper into CPython, but your code will...

Also: the [sourmash](https://github.com/topics/sourmash) topic on github (if we remember to tag projects :sweat_smile: )

Trying again in #2316

> We also have a big conceptual dichotomy, where the code _computing_ signatures behaves as if each `SourmashSignature` may contain multiple `MinHash` objects, but the code _operating_ on signatures behaves...

> and now I'm curious, what operations does the HLL (as implemented) currently support? definitely cardinality counting, and merge. does it support containment as a byproduct of merge? since we...

@ctb this? https://github.com/dib-lab/sourmash/pull/506

ah, I was assuming it was the `parallel` feature that was causing issues, but it is `numpy` trying to parallelize... something. Of note, this happens during `sourmash index`, not `sourmash...

> Sorry, I did not make it clear, the error reported above is from running `sourmash sketch`, not `index`. > > The environmental variables work, but it's kind of tricky...

+100 `HLL` and `Nodegraph` are also good candidates for different sketches, but I like the idea of using the sequence as a sketch type too!