Luiz Irber

Results 71 comments of Luiz Irber

another API testing library: https://github.com/taverntesting/tavern

Good idea! At the CLI level: $ wort view -d sra PRJEB23372 returns 3 signatures, one for each SRR Same thing for the API, I might change the response to...

a gente tem um site (antiguinho...) com um demo do oceansound: http://ocean.datasounds.org Eu tinha começado uma atualização, mas ainda tá num estado bem alpha: http://ocean.datasounds.org/static/test.html Teve uma palestra ótima sobre...

As an aside, this problem is very similar to k-mer indexing in bioinformatics, and there is a [recent literature review][0] which brings up many of the points of this inverted...

More info: I'm trying to fix [this page](https://github.com/dib-lab/sourmash/blob/8503b1075494d41a2e27d44bc1f395a3ab492976/doc/other-languages.md) ([rendered](https://sourmash.readthedocs.io/en/v3.3.1/other-languages.html)). This works both in Sphinx (for readthedocs) and in GitHub, but when I try to use MyST it complains: ``` doc/other-languages.md:35:...

Seems to be updated here: https://bitbucket.org/anthony_tuininga/cx_logging/ On Tue, Jul 28, 2015 at 7:31 PM, Michael R. Crusoe wrote: > > Also, that's a standard 3 clause BSD license, same as...

@standage I fixed the link in your comment, it works now

@UltraSpecialException this error happens because you have a (very) old version of setuptools. Try to do `pip2 install -U setuptools` before running `pip2 install khmer` (in this case you're still...

we can also do ``` diff - self._data = khmer.load_nodegraph(f.name) + self._data = khmer.Nodegraph.load(f.name) ``` (from this PR: https://github.com/dib-lab/sourmash/pull/395/files#diff-0b5baa8c66f625d5b16a6ada6c9aa998R681)

We got around this issue in sourmash with https://github.com/dib-lab/sourmash/pull/508