srf
srf copied to clipboard
SRF: Satellite Repeat Finder
Hi there I ran into this error now, when using srf: ``` srfutils.js enlong $REF.srf.fa > $REF.srf.enlong.fa $/usr/bin/env: k8: No such file or directory ``` Easy fix was to get...
Hi, I would like to package your tool into bioconda. I would prefer to use a release. Could you make a proper GitHub release? Thank you, Best regards
Hi, @lh3 Do you know why the `paf2bed` will introduce a 1bp shift in the bed? ```bash # paf Chr6 32122276 87652 88005 + NIP-T2T#circ20-354 354 0 353 343 353...
Hi Prof Li, I am curious about how to read the results file. Since there are no header and no description in the manuscript. For example, `srf-aln.bed` ``` Hap1Chr10 0...
Hi @lh3 Thanks you yet another excellent tool! I was just looking at using srt and reading the docs: in the 'getting started' section 'analyze' shows mapping the srf.elong.fa to...