Lauren Coombe
Lauren Coombe
Hi Theo, Thanks for the feedback! I have also found for some runs doing those iterative runs yields better results - so in my experience it does indeed depend on...
Hi Theo, Awesome, so glad that you're getting good results! For the overlap trimming, as long as an overlap is detected, it will attempt to do the trimming regardless of...
Hi @ezherman, Thanks for following-up. I believe that I have identified where in the code this is erroneously happening - I'm working on a fix and will update you when...
Quick update - I merged my fix to master branch! There's a more detailed explanation of what I found and how I fixed it in the PR here: #232 Hopefully...
This fix was included in release v3.2.2!
Hi @mochew, Could you provide us with a bit more information, including: - Version of NanoSim installed - How you installed NanoSim and dependencies (ex. conda, source code, etc) -...
Hi @mochew, A couple suggestions: - We highly recommend installing NanoSim fully from conda, ideally in a fresh conda environment: `conda install -c conda-forge -c bioconda nanosim` -> this is...
Hi @huangxin0221, Could you please provide us with more information, including: * Version of NanoSim you are using (is it v3.2.1?) * What model you are using (pre-trained or trained...
Hi @RunpengLuo, Thanks for the detailed information and log - was very helpful to trace the issue! I have a tentative fix in #233, which will hopefully be merged to...
The fix has been included in the newly released v3.2.2