kwynne71

LFQ Phospho search with timsTOF Pro data (converted to mzml with MSConvert)

2

Dear Sir/Madam, I have being trying to carry out a search of 72 Ti02 phospho- enriched proteomics samples, I have previously tried with 4 and the search worked. I converted...

Pulling out information from Spectral Library created from fasta file

2

Hi, Can can I pull out m/z, retention time, charge, ion mobility and protein accession/name from a spectral phospho library created from the reviewed human uniprot database. Best Kieran

FDR ISSUE

2

Hi Fengchao, Hope you are well. I had an error see below, Do you suggest changing the fdr from 0.01 to 0.05 in the "fdr filter and report"section of the...

Dear Sir/Madam, I am getting this message when I use pLink2, would you have any tips. Kind Regards Kieran [pLink] Load File0.Tmp.All.pfd. [pLink] there are no enough spaces to infer...