chromosight

chromosight copied to clipboard

When the input cool file does not have a constant bin size, Chromosight crashes with an obscure error message. We should either provide an informative error message, and/or allow overriding...

cmdoret

Tuning the parameters (perc-zero, perc-undetected, pearson) for a relatively small dataset

2

Dear Chromosight developers: First I'd like to thank you guys for developing such an excellent tool to call loop, and it is undoubtedly one of the best and popular loop...

ZianFang

Recommend parameters of borders detect

1

Hi I'm a green hand of Hi-C. What are the recommended parameters of `chromosight detect --pattern borders`? Especially `min-dist` and `min-dist`. What I have used is ``` chromosight detect \...

yizhang-zoey