Julianus Pfeuffer

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Not sure if the sdrf parser supports annotating the same file with multiple samples in lfq. Was Sdrf supposed to model that?

Although technically correct for a mixture of proteins from different organisms, one would need to philosophize if that is even valid sdrf. Besides reference database generation this information is actually...

For now I would definitely suggest to only use one sample per file and just enter a list of organisms for that sample

Hi Michael, you can easily set time limits for processes with a user-provided config file, however downstream processes most likely will fail. No one ever reported such a problem (ping...

ok then I can refactor the modmap building and uncomment the rest of the tests.

Yes and you can save computations by continuing enumeration in the presence of missed cleavages.

Hi! I think you might be getting this error because of one of the following reasons: - You are running 32-bit Python or a 32-bit Windows - You have not...

Hm ok. Can you list the DLLs or pyds in C:\ProgramData\Python_3.9\lib\site-packages\pyopenms? And potentially even run DependencyWalker on any of the _pyopenms.dlls or .pyds and post a screenshot? https://lucasg.github.io/Dependencies/

Thank you very much for your quick and helpful debugging. Unfortunately, your screenshots actually look very much correct. I think "Dependencies" should show some dependent DLLs as red, in case...

Hi! Maybe the missing ordinals are a problem, but they are from a system library, not anything that we ship. The incorrect checksums are less likely to be a problem,...