John Lees

Results 182 comments of John Lees

``` 11:09:02 BIOCONDA INFO (ERR) Encountered problems while solving: 11:09:02 BIOCONDA INFO (ERR) - nothing provides requested mandrake 11:09:02 BIOCONDA INFO (ERR) - nothing provides requested pp-sketchlib >=2.0.1 11:09:02 BIOCONDA...

@bioconda/core I am again having issues with the linux build timing out here – any advice?

> @johnlees if related to build, anyway to reduce space used? > > ``` > [API error (500): {"message":"write /usr/local/share/doc/hwloc/hwloc-letter.pdf: no space left on device"} > ``` @rpetit3 not that...

I think this is likely to impact future releases. Would it be sensible to move to conda-forge? That would also require moving over dependencies rapidnj, treeswift and dendropy... or I...

Note to self, all of those tree packages would be completely fine as optional dependencies – should come back to this

Although note SIMD is important, so may not always be useful

We should fix the multi-contig reference, the code in ska map does this and we should be able to port it over to ska lo

Thanks for noting this. We have also had reports on distance changes in #92, #81 and #69 which may be useful to look at. Differences are due to different defaults...

See #97 and #98 -- this should now be fixed in v0.4.1

> Versions of input databases sketches are different, results may not be compatible This is usually not an issue, and you are using the latest version. > all the samples...