Jianshu_Zhao

Hello all, static build (feature openblas-static) on MacOS just does not work no matter it is M1 or Intel. It seems there are some problems with compiling. I will add...

[apple_M1_static_openblas_error.txt](https://github.com/rust-ndarray/ndarray-linalg/files/9522219/apple_M1_static_openblas_error.txt) FYI. M1 error. I can successfully build with openblas-static on intel cpus on macOS. Thanks, Jianshu

Hello all, It seems with OpenBLAS 0.3.21, similar error appears when statically linking (dynamic linking is ok) for my intel MacOS (Monterey): = note: Undefined symbols for architecture x86_64: "__gfortran_concat_string",...

Hello， How exactly can I do that？ Since i use v 0.15 from crate.io. Thanks Jianshu

This is intel-mkl-static static link error (dynamic link is ok) on intel MacOS: = note: Undefined symbols for architecture x86_64: "_cblas_sgemm", referenced from: __ZN7ndarray6linalg11impl_linalg12mat_mul_impl17h92b8364d9bc0e871E in annembed-61e783314e7c0a52.annembed.5de54790-cgu.9.rcgu.o "_sgelqf_", referenced from: __ZN8annembed5tools9svdapprox5do_qr17h0d0d10466375a1bcE...

running example with static is ok. The above mentioned error appeared when link to a binary statically for other binary crates. Jianshu

I agree with this idea. And it looks like not all gene prediction tool behave the same. FragGeneScan could also be used as the prediction step. https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btab827/6454948?rss=1# Jianshu

Hello All, many thanks for those discussion. @widdowquinn , I agree with you generally and kostas and I actually had a very long discussion on this topic last week. In...

Hello Matt, Thanks for the quick response, what if I want to pre cluster at 85% ANI, then exact ANI at 90%, but the sketch size 1000, will never approximate...

Hi Matt, True, most of the cases, users want to dereplicate at higher ANI so speed is more important. I was in a case where I want to cluster at...