Jennifer Hillman-Jackson

Results 114 issues of Jennifer Hillman-Jackson

For both edit attributes and the upload tool. This datatype is a required input for existing tools.

Bad links? Observed at http://usegalaxy.org Screenshot

Perhaps the link is outdated or there is some other configuration issue? Review the tool on main, the link is in the help section: --- ##

Error: tool id: toolshed.g2.bx.psu.edu/repos/devteam/lastz/lastz_wrapper_2/1.2.2 tool version: 1.2.2 ## job tool version: job command line: ## None job stderr: python: can't open file '/galaxy/main/migrated_tools/toolshed.g2.bx.psu.edu/repos/devteam/lastz/0801f8207d30/lastz/lastz_wrapper.py': [Errno 2] No such file or directory...

Example tool: toolshed.g2.bx.psu.edu/repos/jjohnson/mothur_toolsuite/mothur_align_seqs/1.20.0 ping @natefoo

Was meme_meme ready to be deployed on Main or was the install incomplete? I see some activity in tools-iuc for it, but not sure if those mods impact usability for...

functionality usegalaxy.org

Discussion/PR: https://github.com/galaxyproject/tools-devteam/pull/521 MTS and other details in that PR. Plan is to install on Test, test it there, then promote to Main and retest final time in that environment. Adding...

wip
install usegalaxy.org

MTS: https://toolshed.g2.bx.psu.edu/view/rnateam/chipseeker/b418a1d3585d Use-case examples here: https://github.com/galaxyproject/tools-iuc/issues/2370

install usegalaxy.org
test/retest-do

Optimizing RAM usage to avoid even small-ish job memory failures. Discussion/PR: https://github.com/galaxyproject/tools-iuc/pull/2421 MTS: https://toolshed.g2.bx.psu.edu/view/iuc/seqtk/a09586d5149a

wip
install usegalaxy.org

New repo: https://toolshed.g2.bx.psu.edu/view/bgruening/bismark/78c791a11b4c @natefoo Could main process data with this tool given current cluster resources? @bgruening Anything special we should consider if add this tool suite? Related tools in the...

question
install usegalaxy.org