MEME (meme_meme) tool has dependency issues at http://usegalaxy.org

[jennaj]

Was meme_meme ready to be deployed on Main or was the install incomplete? I see some activity in tools-iuc for it, but not sure if those mods impact usability for this tool version. Error message suggests not and missing dependencies are the problem. meme_fimo works fine.

Also, there is a newer version in the toolshed: 4.11.0.1. Might want to install that one when updating.

ping @davebx @gregvonkuster

Galaxy Tool ID: toolshed.g2.bx.psu.edu/repos/iuc/meme_meme/meme_meme/4.11.0.0

Error:

Tool execution generated the following error message: mv: cannot stat `/galaxy-repl/main/jobdir/012/087/12087038/dataset_14747469_files/meme.html': No such file or directory The tool produced the following additional output: Warning: Can not convert EPS file to PNG as no install of Image Magick or Ghostscript is usable. Can't locate XML/Parser/Expat.pm in @INC (@INC contains: /galaxy-repl/main/deps/meme/4.11.0/iuc/package_meme_4_11_0/6ee2e1225125/bin /galaxy/main/deps/meme/4.11.0/iuc/package_meme_4_11_0/6ee2e1225125/lib/perl /galaxy/main/perl5/lib/x86_64-linux-thread-multi /galaxy/main/perl5/lib /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at /galaxy/main/deps/meme/4.11.0/iuc/package_meme_4_11_0/6ee2e1225125/lib/perl/CheckingSAX.pm line 12. BEGIN failed--compilation aborted at /galaxy/main/deps/meme/4.11.0/iuc/package_meme_4_11_0/6ee2e1225125/lib/perl/CheckingSAX.pm line 12. Compilation failed in require at (eval 12) line 3. ...propagated at /usr/share/perl5/base.pm line 94. BEGIN failed--compilation aborted at /galaxy/main/deps/meme/4.11.0/iuc/package_meme_4_11_0/6ee2e1225125/lib/perl/MemeSAX.pm line 3. Compilation failed in require at /galaxy/main/deps/meme/4.11.0/iuc/package_meme_4_11_0/6ee2e1225125/bin/meme_xml_to_html line 48. Warning: meme_xml_to_html exited abnormally and may have failed to create HTML output. Error running MEME.