Jake Pennington

@katjaReinhard Can you please check that you're attaching the correct log file? That one is identical to the one uploaded above. Maybe try renaming it before uploading, it's possible github...

Thanks. Just double checking, neither of you saw any error message in the GUI or terminal you were using to run Kilosort? I can see there's no error in the...

Interesting.. that type of crash does make me think it's related to the hardware rather than Kilosort, but definitely something to check on. Are either of you able to share...

Yes, using more than 32GB is definitely not expected for a recording that size. There are steps of the pipeline that primarily use GPU, and other steps that primarily use...

A google drive link has worked best. You can post the link here, or e-mail it to me at [email protected]

@katjaReinhard Great, thanks for the information! Just a reminder for anyone else coming across this issue: before submitting a bug report, please try running KS4 alone without spikeinterface (or any...

@ttmysd70c6f5 Sorry for the long delay, I guess this got buried under the other issues. Update from my end: I was able to sort your data without issue using `v4.0.16`...

Please make sure you are using the latest version of Kilosort4, and run it without SpikeInterface. If you still encounter the error, upload `kilosort4.log` here from the results directory.

@hiroyukioya My guess is that because of your large batch size, that step is not selecting enough data to cluster the waveforms for making templates, unless your recording is quite...

If you still encounter problems after trying the above changes please let us know and we can re-open this.