Jake Pennington
Jake Pennington
You're right, that is counter-intuitive. Sorry, I was thinking about it backwards. I did some more testing and zoomed in a bit for a single block. It looks like increasing...
Okay, we did identify a bug related to this that we'll have to work on. Thanks again for your patience and for helping point that out.
This is not what the verbose option is used for, it's specifically for adding low-level debugging information to the log. The progress bar is necessary for the GUI animation. Are...
Okay, thanks. This was on the todo list at some point, I'll take another look. I'd rather not add yet another option to manually disable something that shouldn't happen in...
I guess I misremembered this issue... Looking at the logs generated now, I don't see any of the tqdm progress bar information there *when running Kilosort4 on its own*. I...
I still haven't been able to reproduce this. Unless someone can provide an example of this without using Spikeinterface, I don't see anything to change on the Kilosort end.
This is not easily doable right now since the plots are generated through `pyqtgraph` for better performance. Adding separate plotting utilities for cases like this is on the todo list.
Added with v4.0.33.
@ttmysd70c6f5 It says you used Kilosort versions 4.0.5 and 4.0.16. Did it crash in the same place when using the latter version? That should have generated a log file at...
Okay, thanks. Can you also attach a screenshot of what the Kilosort4 GUI looks like after loading the data? If you're using the GUI.