Julie Iskander

icon indicating a website link https://draft.blogger.com/blog/posts/5306905461866579521

icon company WEHI icon location Australia icon location I am mostly a software engineer, and also a biomechanist, trying to go into bioinformatics but mainly an engineer.

Results 6 comments of Julie Iskander

nextflow nextflow/23.04.2 and tower.yml

[nextflow.log](https://github.com/nextflow-io/nextflow/files/11955476/nextflow.log)

nextflow nextflow/23.04.2 and tower.yml

it works fine on nextflow v22 but not v23

nextflow nextflow/23.04.2 and tower.yml

Another issue I found is that tower.yml works fine when launching the pipeline for Tower GUI. If I have a running through cmd, no reports are created. No errors with...

missing compile_metrics.py file

Same here. Cannot find compile_metrics.py.

psipred4 missing

Is this the correct package https://github.com/psipred/psipred to use?

DAlphaBall missing

Thanks. I downloaded and made that but I still get the same error as follows. It keeps saying `sh: ............/DAlphaBall.gcc: No such file or directory ace` but I have checked...