Jordan Berg

Results 23 comments of Jordan Berg

If no one is working on the "Statistical hypothesis testing", I can help out with that.

Hi - this is definitely not normal. Can you provide me with the steps you took to import the RECON model? Could you also point me to the URL where...

That you for providing these details. I am currently wrapping up some fixes for v0.11.0. After this is released, I will put this on my to-do list as the next...

Partially answering your question - I was able to get the Recon database to load into Metaboverse. My guess as to why it got stuck at 0% is there may...

Hey sorry - just checking in to say I haven't forgotten about this, just haven't had the bandwidth recently. Hoping to get to it soon!

Any chance of getting it on the osx-64 channels? I try and receive the following output: $ conda install sickle-trim Fetching package metadata ............... PackageNotFoundError: Package missing in current osx-64...

Making some progress here -- I was able to get the Arabidopsis model into Metaboverse format. Some things we will need to work on though... 1) It does not appear...

Thanks for reaching out. Do you get any error or progress log files being output in your specified output location? It's interesting that the sample files work fine, because the...

Thanks for the details - let me dig into this this weekend. @matthew-mj from your log it looks like you were using v 0.11.2. @liudi826-cell - is this the same...

Ah, okay. Reactome may have updated their API, which could also be leading to issues in curation. That is helpful to know, thank you!