Jordan Berg

Ah okay, good to know. Maybe a temporary glitch with the Reactome API. Regardless, I'll dig into it this weekend and see what I can turn up. Thanks for your...

I tracked down the issue. It's related to an update in how Reactome is formatting some of their database. I am working on a fix and hoping to get it...

Hi all - I think I was able to hunt down all the bugs and some other related things along the way. I want to do some additional stress testing...

Hi all - https://github.com/Metaboverse/Metaboverse/releases/tag/v0.11.3 has been released. Due to some recent changes to dependencies, I am having issues compiling MacOS version for x64 (Intel) chips and can only deliver an...

Can you check that you are able to run with the human metabolomics test data? This looks like you are making some progress, but there is a character in your...

@matthew-mj - awesome! Let me know if you have an other questions or run into further issues!

@liudi826-cell - I am able to curate a network with the data you provided. It is likely that the copy/pasting into the browser forced a compatible character replacement that the...

@liudi826-cell - I just wanted to check in to see how things were going and whether the files I shared worked for you. If so, I will go ahead and...

Conversation continued to email for specific data questions. Going to close this issue for the time being.

Yeah, while all dependencies installed, I have been running into some finicky behavior downstream. I am trying to run: ``` from matchms import calculate_scores from matchms.importing import load_from_msp from ms2deepscore...