João Sequeira

I came here searching for an answer for the same problem. As the error message explains, we are trying to install quast on a conda environment that has python 3.7...

It doesn't work that easily if you want to use it in a docker image. Pip install is the easiest solution in this case, and works as good as using...

I have still not been able to solve it

This is a problem on KEGG's part, seems like they limit the ammount of information outputed per request. When I input less IDs at a time (e.g. 20 for each...

Seems they don't specify it in their [documentation](https://www.kegg.jp/kegg/rest/keggapi.html). If it was somehwere, it would be there, since I see that for `list`, they specify "The maximum number of identifiers that...

Thank you for the answer, @iromeo ! This is happening only for the *.py scripts, although the *.smk files have another problem, where it doesn't recognize stuff coming from the...

Following this example rpsblast claims the arguments are wrong, and it works after I adjust the command to ``` rpsblast -i GCF_000005845.2_ASM584v2_protein.faa -d Cog -o rps-blast.out -m 8 ``` which...

@utkinaira I did manage to find the answer [here](https://github.com/aleimba/bac-genomics-scripts/issues/7). Turns out the IDs of CDD changed format, changing the output of rps-blast

This CLI version of VizBin returns a coordinates file. Is there any sort of output that informs on which contigs are grouped into which automatic clusters?

Thank you for the fast reply! And congratulations for a nice looking tool!