Results 43 issues of Ioannis Magkanaris

**Describe the bug** Using `cmake` to build my application and `catch_discover_tests` to find all the `catch` tests defined, I came across the following issue. While it's possible to set `PROPERTIES`...

Help wanted
Extras

Current state of random distribution implementations that need to be changes in NEURON: - [ ] ACG (random number generator that needs removal?) this is a https://en.cppreference.com/w/cpp/numeric/random/linear_congruential_engine - [ ]...

- Added `nrntraub` test and run it with 4 ranks and 9 threads on BB5 with the SoA `CoreNEURON` build - Uses https://github.com/iomaganaris/nrntraub/tree/icei which creates the `coredat` by default in...

**Description** Fixes issue with ion variables initial values not being in set in file mode transfer of data between NEURON and CoreNEURON. Even if this seems like an issue it...

**Description** Added asynchronous execution of kernels in multiple GPU streams. Still there are some constructs that the compiler doesn't support: 1. `#pragma omp target update to() depend(inout: stream) nowait` is...

**Describe the issue** Some of the NEURON test are failing on GPU when CUDA Unified Memory is enabled in CoreNEURON. More precisely the tests that fail are: ``` The following...

bug
gpu
neuron

During validation of NetPyNE results we figured out that there was an issue with the calculation of `iontype` for each section. This issue was fixed in #775. We should add...

tests

Some scripts in NEURON when instantiating the cells might define the initial value of ion variables like: ``` ko0_k_ion = 3.82 //mM ki0_k_ion = 140 //mM ``` These variables (from...

bug
neuron
netpyne
frontiers-paper-2021

Currently the CI didn't manage to catch an issue like https://github.com/BlueBrain/CoreNeuron/issues/667 **Describe the solution you'd like** We should try and reproduce this issue with another small test (maybe https://github.com/nrnhines/tqperf) and...

CI
tests
improvement
frontiers-paper-2021

Similar to what is compared and validated at the moment in CVF (mod2c, nmodl, ISPC backend) we should add the ability to validate the channels on GPUs as well using...

enhancement
gpu
mod2c
CI
tests
improvement