Ryan Layer

Seems like adding a —similarity to bedtools intersect would be a better place to collect these > On Nov 30, 2019, at 11:34 AM, Aaron Quinlan wrote: > > ...

We can add that. You may also try the —jitter option thanks to @pontushojer > On Feb 22, 2022, at 4:14 AM, aakankshasingh-evobio ***@***.***> wrote: > >  > Hello!...

I am not sure about why the linked reads arnt showing. Could it be b/c you are too zoomed in to see other reads from the same molecule? The plink...

What would you want to see? On Tue, Oct 27, 2020 at 9:48 AM jjfarrell wrote: > When adding the annotation at the bottom of the plot, the gene names...

> On Dec 18, 2020, at 4:06 PM, yasin-uzun wrote: > >  > This is an incredible tool that must absolutely be published. Thank you for developing this superb...

samplot_vcf gives DHFFC in its list of SVs Does that work? > On Sep 19, 2020, at 12:45 PM, jjfarrell wrote: > >  > Could the duphold QC metrics...

can you share a snip of the BAM that contains the region of interest and the common you used to generate the image? On Wed, Sep 23, 2020 at 8:51...

It looks promising. Can you play with the zoom a bit to get rid of those two pairs with huge insert sizes? On Wed, Aug 25, 2021 at 10:53 PM...

Have you raised your ulimit? On Thu, Mar 25, 2021 at 5:07 AM Fei Zhao ***@***.***> wrote: > I had the same problem > > — > You are receiving...

Can you try this one? http://ryanlayer.github.io/giggle/index.html?primary_index=stix.colorado.edu/rme&ucsc_index=stix.colorado.edu/ucsc On Fri, Mar 8, 2019 at 1:37 PM Jayaram Kancherla wrote: > hello, > > I was trying to run the interactive heatmap example,...