Oliver Schwengers

No currently there is no such parameter. We configured the locus tag step size to a default of 5 to leave some space for potential refinements and additions after the...

@1996xjm , I just opened a dedicated issue for that: #279, so we can discuss this in a particular space. With that, I'd close this one.

Hi and thanks a lot for this very detailed description. This is very interesting and the first time I see this type of error occurring. Unfortunately, as I do not...

I'd keep an eye on `sqlite` and `python` itself. And could you maybe try to use a non-`3.12` Python version, so `3.9`, `3.10` or `3.11`?

@prekijpatel any updates? Thanks

Thanks for the update, and no pressure intended at all. Just a gentle `keep alive ping` to sort out stalled issues ;-)

Hi @abelTan131 , @gracehm , thanks for reporting. We also see these issues with the `AMRFinderPlus` update from time to time. However, I'm still puzzled what causes these effects. I...

Hi @aldertzomer, sorry for the late reply. No, the issue you've referenced is quite old and is already fixed IMHO. So, I don't think that this error is related to...

Could you please try to update Bakta and AMRFInderPlus to the latest versions and then re-install the Bakta db? It is certainly related to different Software/Database version dependencies of AMRFinderPlus....

Hi @StickHu , this seems to be a generic issue on your site. Looks like your machine cannot access the NCBI FTP server at all. Could you ask a local...