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Adding more color legends and using distinct colors

2

Having shown GosCan to some people who haven't seen before, I have heard requests to add legends and remove abbreviations. In the linear view: CNV -> copy number variants LOH...

dominikglodzikhms

Want to remove `undefined` on tooltips & addressing overlaps between drivers

3

If a driver file does not include one of the optional attributes (according to documentation), the display shows "undefined", rather than a blank. More of a style issue, but of...

vstevensf

Clarify the use of `chr` prefix in documentation

2

sehilyi

Supports a common analysis worfklow when users want to see the regions with driver mutations in detail.

DominikGlodzik

Clicking a mutation or an indel in the linear view would trigger a .bam file display. This way, users will be able to assess evidence for each mutation too.

DominikGlodzik

sehilyi

Mutation display

3

If Gosling already allows that, would be helpful to add the ability to show bases (in the read view) that are absent in reference genome. This makes it easy to...

dominikglodzikhms

https://googlegenomics.readthedocs.io/en/latest/use_cases/browse_genomic_data/igv.html

sehilyi

LOH is different between linear and circular

1

sehilyi

Support faster rendering of SV

3

Example spec to test: https://gist.github.com/sehilyi/66a1091fc3766be1a76718bfaf79c491

sehilyi