Dan Handwerker

I do not want file names with things like `nonaggr` because we don't actually know what our non agressive vs agressive options are yet and we're also giving users options...

This relates to #59 which currently has a suggestion to consider nib-diff. From the Feb 2020 dev call, it sounds like we don't want CI to fail based on changes...

- [ ] How to figure out if denoising ran correctly (i.e. easy summary stats) - [ ] How to figure out what can be run better, if the summary...

From the January developer's call: We wanted to loop in @smoia who observed something related to automatic dependency checking that may be relevant for this issue. If you have anything...

It looks like SciPy 1.8 may now support Python 3.10. Worth confirming? https://docs.scipy.org/doc/scipy/release.1.8.0.html

I was talking about this with @afni-dglen and he made a suggestion for one issue that was bothering me. I wanted to document that suggestion, while it's on my mind....

Another comment from @afni-dglen was that, in the current decision tree, we are only recording the final decision in the tree before accept/reject/ignore. This becomes an issue if people can...

@jbteves That's about right. One minus of this approach is that every function that has the ability to alter the decision for an item would need a unique identifier. This...

I’m trying to get things ready for the modularization effort at the hackathon. I’ve sketched out issues and ideas for the full decision tree pipeline. This narrative document is at:...

I really like the idea of adding several example preprocessing pipelines and noise regression pipelines to the documentation. I think the question of how to connect this information to the...